Transcript: lnc-ERAL1-1:1

Basic information

LNCipedia transcript ID: lnc-ERAL1-1:1 
LNCipedia gene ID: lnc-ERAL1-1
Location (hg38): chr17:28861097-28861457
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 361 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000580595.1; MIR451B-001; OTTHUMT00000447013.1; NONHSAT052656
Alternative gene names: ENSG00000265079.1; MIR451B; OTTHUMG00000179545.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.9449 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERAL1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ERAL1-1:1
4.0 lnc-ERAL1-1:1
4.1 lnc-ERAL1-1:1
5.0 lnc-ERAL1-1:1
5.1 lnc-PIPOX-1:8
5.2 lnc-ERAL1-1:1