Transcript: lnc-ERCC1-1:5

Basic information

LNCipedia transcript ID: lnc-ERCC1-1:5 
LNCipedia gene ID: lnc-ERCC1-1
Location (hg38): chr19:45413436-45414477
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 508 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT066777
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.6166 non-coding 
CPAT coding probability 7.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERCC1-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP1R13L-1:3
4.0 lnc-ERCC1-1:5
4.1 lnc-ERCC1-1:5
5.0 lnc-ERCC1-1:5
5.1 lnc-GPR4-7:3
5.2 lnc-ERCC1-1:5