Transcript: lnc-ERFE-3:1

Basic information

LNCipedia transcript ID: lnc-ERFE-3:1 
LNCipedia gene ID: lnc-ERFE-3
Location (hg38): chr2:238203805-238205256
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1452 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000047237.1|ENCT00000237736.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.1015 non-coding 
CPAT coding probability 5.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERFE-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM132B-3:1
5.0 lnc-FAM132B-3:1
5.1 lnc-SCLY-3:1
5.2 lnc-ERFE-3:1