Transcript: lnc-ERG-9:11

Basic information

LNCipedia transcript ID: lnc-ERG-9:11 
LNCipedia gene ID: lnc-ERG-9
Ensembl Gene ID: ENSG00000205622
Ensembl Transcript ID: ENST00000626259
Location (hg38): chr21:38863676-38912921
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 773 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626259.2
Alternative gene names: ENSG00000205622.9; AF064858.6; AP001043.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -68.6855 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERG-9:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ERG-9:11
4.1 lnc-ERG-9:11
5.0 lnc-ERG-9:11
5.1 lnc-CRYZL1-70:11
5.2 lnc-ERG-9:11