Transcript: lnc-ERGIC2-3:3

Basic information

LNCipedia transcript ID: lnc-ERGIC2-3:3 
LNCipedia gene ID: lnc-ERGIC2-3
Location (hg38): chr12:29141331-29148279
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1077 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020749; NONHSAT027480
Alternative gene names: XLOC_010037; linc-PTHLH-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.8928 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERGIC2-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERGIC2-4:1
3.1 lnc-ERGIC2-4:1
4.0 lnc-ERGIC2-3:3
4.1 lnc-ERGIC2-3:3
5.0 lnc-ERGIC2-3:3
5.1 lnc-WBP11-117:3
5.2 lnc-ERGIC2-3:3