Transcript: lnc-ERICH1-20:2

Basic information

LNCipedia transcript ID: lnc-ERICH1-20:2 
LNCipedia gene ID: lnc-ERICH1-20
Location (hg38): chr8:1733030-1755812
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6021 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101401.1|MICT00000337657.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.6826 non-coding 
CPAT coding probability 5.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-20:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ERICH1-20:2
5.0 lnc-ERICH1-20:2
5.1 lnc-DEFA1B-74:1
5.2 lnc-ERICH1-20:2