Transcript: lnc-ESAM-65:1

Basic information

LNCipedia transcript ID: lnc-ESAM-65:1 
LNCipedia gene ID: lnc-ESAM-65
Ensembl Gene ID: ENSG00000279342
Ensembl Transcript ID: ENST00000638898
Location (hg38): chr11:124789240-124792818
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3579 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000638898.1
Alternative gene names: ENSG00000279342.2; AP000866.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -81.1326 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESAM-65:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ADAMTS8-65:1
5.1 lnc-ADAMTS8-65:1
5.2 lnc-ESAM-65:1