Transcript: lnc-ESM1-1:4

Basic information

LNCipedia transcript ID: lnc-ESM1-1:4 
LNCipedia gene ID: lnc-ESM1-1
Ensembl Gene ID: ENSG00000240535
Ensembl Transcript ID: ENST00000595218
Location (hg38): chr5:55021349-55034270
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 794 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT101462; ENST00000595218.1; ENST00000595218.5
Alternative gene names: ENSG00000240535.4; CTD-2313F11.1; ENSG00000240535.8; AC034238.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -235.0799 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESM1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ESM1-1:4
4.0 lnc-ESM1-1:4
4.1 lnc-ESM1-1:4
5.0 lnc-ESM1-1:4
5.1 lnc-ACTBL2-36:2
5.2 lnc-ESM1-1:4