Transcript: lnc-ESPN-5:2

Basic information

LNCipedia transcript ID: lnc-ESPN-5:2 
LNCipedia gene ID: lnc-ESPN-5
Location (hg38): chr1:6393535-6400294
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6760 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271746.1|ENCT00000000742.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 170.3767 coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ESPN-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ESPN-2:3
5.0 lnc-ESPN-2:3
5.1 lnc-VAMP3-29:2
5.2 lnc-ESPN-5:2