Transcript: lnc-ESPN-5:4

Basic information

LNCipedia transcript ID: lnc-ESPN-5:4 
LNCipedia gene ID: lnc-ESPN-5
Location (hg38): chr1:6393886-6394609
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 724 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271746.1|FTMT20400000307.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -51.7439 non-coding 
CPAT coding probability 6.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESPN-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ESPN-2:5
5.0 lnc-ESPN-2:5
5.1 lnc-VAMP3-29:4
5.2 lnc-ESPN-5:4