Transcript: lnc-ESR2-3:6

Basic information

LNCipedia transcript ID: lnc-ESR2-3:6 
LNCipedia gene ID: lnc-ESR2-3
Location (hg38): chr14:64357307-64388257
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 385 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258809.1|FTMT25300000239.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.4769 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESR2-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ESR2-3:6
5.0 lnc-ESR2-3:6
5.1 lnc-DHRS7-43:2
5.2 lnc-ESR2-3:6