Transcript: lnc-ESRP1-1:2

Basic information

LNCipedia transcript ID: lnc-ESRP1-1:2 
LNCipedia gene ID: lnc-ESRP1-1
Ensembl Gene ID: ENSG00000254315
Ensembl Transcript ID: ENST00000521010
Location (hg38): chr8:94533628-94534391
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521010.1; RP11-267M23.3-001; OTTHUMT00000378865.1; NONHSAT127775
Alternative gene names: ENSG00000254315.1; RP11-267M23.3; OTTHUMG00000164452.1; AC023632.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.8536 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESRP1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC023632.1-1:1
4.0 lnc-AC023632.1-1:1
4.1 lnc-AC023632.1-1:1
5.0 lnc-AC023632.1-1:1
5.1 lnc-CA2-100:1
5.2 lnc-ESRP1-1:2