Transcript: lnc-ESS2-1:1

Basic information

LNCipedia transcript ID: lnc-ESS2-1:1 
LNCipedia gene ID: lnc-ESS2-1
Ensembl Gene ID: ENSG00000272682
Ensembl Transcript ID: ENST00000609936
Location (hg38): chr22:19124309-19128449
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1514 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609936.1
Alternative gene names: ENSG00000272682.1; AC004471.10; AC004471.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 148.9711 coding 
CPAT coding probability 25.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ESS2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DGCR14-1:1
4.0 lnc-DGCR14-1:1
4.1 lnc-DGCR14-1:1
5.0 lnc-DGCR14-1:1
5.1 lnc-RTN4R-25:1
5.2 lnc-ESS2-1:1