Transcript: lnc-ETNK1-1:6

Basic information

LNCipedia transcript ID: lnc-ETNK1-1:6 
LNCipedia gene ID: lnc-ETNK1-1
Location (hg38): chr12:22544295-22620534
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4774 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000008315.1|MICT00000075162.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
YFIFIDAK 93.3333333333333% sense-2
Lee translation initiation sites non-coding 
PhyloCSF score -8.0216 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ETNK1-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ETNK1-1:6
5.0 lnc-ETNK1-1:6
5.1 lnc-KIAA1551-109:5
5.2 lnc-ETNK1-1:6