Transcript: lnc-ETS1-1:1

Basic information

LNCipedia transcript ID: lnc-ETS1-1:1 
LNCipedia gene ID: lnc-ETS1-1
Location (hg38): chr11:128616675-128621816
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 464 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000532563.2; RP11-264E20.1-002; OTTHUMT00000386222.2; NONHSAT025070
Alternative gene names: ENSG00000255465.2; RP11-264E20.1; OTTHUMG00000165790.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -383.523 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETS1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ETS1-1:1
4.0 lnc-ETS1-1:1
4.1 lnc-ETS1-1:1
5.0 lnc-ETS1-1:1
5.1 lnc-ADAMTS8-28:5
5.2 lnc-ETS1-1:1