Transcript: lnc-ETS1-1:3

Basic information

LNCipedia transcript ID: lnc-ETS1-1:3 
LNCipedia gene ID: lnc-ETS1-1
Location (hg38): chr11:128615865-128621806
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1159 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000531784; ENST00000531784.1; RP11-264E20.1-001; OTTHUMT00000386221.1; NONHSAT025069
Alternative gene names: ENSG00000255465; RP11-264E20.1; ENSG00000255465.2; OTTHUMG00000165790.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.2916 non-coding 
CPAT coding probability 81.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ETS1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ETS1-1:2
3.1 lnc-ETS1-1:3
4.0 lnc-ETS1-1:3
4.1 lnc-ETS1-1:3
5.0 lnc-ETS1-1:3
5.1 lnc-ADAMTS8-28:6
5.2 lnc-ETS1-1:3