Transcript: lnc-ETS1-1:4

Basic information

LNCipedia transcript ID: lnc-ETS1-1:4 
LNCipedia gene ID: lnc-ETS1-1
Ensembl Gene ID: ENSG00000245008
Ensembl Transcript ID: ENST00000531784
Location (hg38): chr11:128615867-128621806
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1157 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000531784.2
Alternative gene names: ENSG00000255465.3; RP11-264E20.1; AP001995.1; ENSG00000245008.4; AP001122.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.2916 non-coding 
CPAT coding probability 81.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ETS1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ETS1-1:4
4.0 lnc-ETS1-1:4
4.1 lnc-ETS1-1:4
5.0 lnc-ETS1-1:4
5.1 lnc-ADAMTS8-28:7
5.2 lnc-ETS1-1:4