Transcript: lnc-ETS1-1:7

Basic information

LNCipedia transcript ID: lnc-ETS1-1:7 
LNCipedia gene ID: lnc-ETS1-1
Ensembl Gene ID: ENSG00000245008
Ensembl Transcript ID: ENST00000572256
Location (hg38): chr11:128629653-128686428
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 541 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025071; ENST00000572256.1
Alternative gene names: ENSG00000245008.3; RP11-744N12.3; AP001122.1; ENSG00000245008.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.2679 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETS1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-744N12.3.1-2:2
4.0 lnc-RP11-744N12.3.1-2:2
4.1 lnc-RP11-744N12.3.1-2:2
5.0 lnc-RP11-744N12.3.1-2:2
5.1 lnc-ADAMTS8-28:3
5.2 lnc-ETS1-1:7