Transcript: lnc-ETS1-1:8

Basic information

LNCipedia transcript ID: lnc-ETS1-1:8 
LNCipedia gene ID: lnc-ETS1-1
Ensembl Gene ID: ENSG00000245008
Ensembl Transcript ID: ENST00000602773
Location (hg38): chr11:128614340-128615236
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 897 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT025068; ENST00000602773.1
Alternative gene names: ENSG00000270160.1; RP11-264E20.2; AP001995.2; ENSG00000245008.4; AP001122.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.9404 non-coding 
CPAT coding probability 9.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETS1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ETS1-4:1
4.0 lnc-ETS1-4:1
4.1 lnc-ETS1-4:1
5.0 lnc-ETS1-4:1
5.1 lnc-ADAMTS8-28:8
5.2 lnc-ETS1-1:8