Transcript: lnc-EXD2-10:3

Basic information

LNCipedia transcript ID: lnc-EXD2-10:3 
LNCipedia gene ID: lnc-EXD2-10
Location (hg38): chr14:69153323-69153866
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 544 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000019416.1|HBMT00000431995.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -225.5927 non-coding 
CPAT coding probability 7.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXD2-10:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EXD2-8:4
5.0 lnc-EXD2-8:4
5.1 lnc-ACOT2-70:3
5.2 lnc-EXD2-10:3