Transcript: lnc-EXOC2-3:1

Basic information

LNCipedia transcript ID: lnc-EXOC2-3:1 
LNCipedia gene ID: lnc-EXOC2-3
Location (hg38): chr6:277864-286279
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 721 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012034; NONHSAT105990
Alternative gene names: XLOC_005567; linc-PDCD2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.288 non-coding 
CPAT coding probability 32.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXOC2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EXOC2-3:1
3.1 lnc-EXOC2-3:1
4.0 lnc-EXOC2-3:1
4.1 lnc-EXOC2-3:1
5.0 lnc-EXOC2-3:1
5.1 lnc-ECI2-207:1
5.2 lnc-EXOC2-3:1