Transcript: lnc-EXT2-2:1

Basic information

LNCipedia transcript ID: lnc-EXT2-2:1 
LNCipedia gene ID: lnc-EXT2-2
Location (hg38): chr11:44301379-44305232
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 837 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA230:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -187.6841 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXT2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-EXT2-2:1
4.1 lnc-EXT2-2:1
5.0 lnc-EXT2-2:1
5.1 lnc-CAPRIN1-73:1
5.2 lnc-EXT2-2:1