Transcript: lnc-F13A1-3:1

Basic information

LNCipedia transcript ID: lnc-F13A1-3:1 
LNCipedia gene ID: lnc-F13A1-3
Location (hg38): chr6:6711712-6745415
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 626 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012072; NONHSAT107570
Alternative gene names: XLOC_005595; linc-F13A1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.75 non-coding 
CPAT coding probability 8.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F13A1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-F13A1-1:1
3.1 lnc-F13A1-3:1
4.0 lnc-F13A1-3:1
4.1 lnc-F13A1-3:1
5.0 lnc-F13A1-3:1
5.1 lnc-ECI2-161:10
5.2 lnc-F13A1-3:1