Transcript: lnc-F13A1-3:4

Basic information

LNCipedia transcript ID: lnc-F13A1-3:4 
LNCipedia gene ID: lnc-F13A1-3
Location (hg38): chr6:6696749-6712060
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 888 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00012069
Alternative gene names: XLOC_005595; linc-F13A1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.7862 non-coding 
CPAT coding probability 40.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-F13A1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-F13A1-1:4
3.1 lnc-F13A1-3:4
4.0 lnc-F13A1-3:4
4.1 lnc-F13A1-3:4
5.0 lnc-F13A1-3:4
5.1 lnc-ECI2-161:15
5.2 lnc-F13A1-3:4