Transcript: lnc-F13A1-5:1

Basic information

LNCipedia transcript ID: lnc-F13A1-5:1 
LNCipedia gene ID: lnc-F13A1-5
Location (hg38): chr6:6311015-6383746
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 891 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3098_chr6:6311247-6383979_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.57 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F13A1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F13A1-5:1
4.0 lnc-F13A1-5:1
4.1 lnc-F13A1-5:1
5.0 lnc-F13A1-5:1
5.1 lnc-ECI2-151:1
5.2 lnc-F13A1-5:1