Transcript: lnc-F8A2-1:2

Basic information

LNCipedia transcript ID: lnc-F8A2-1:2 
LNCipedia gene ID: lnc-F8A2-1
Ensembl Gene ID: ENSG00000225393
Ensembl Transcript ID: ENST00000447347
Location (hg38): chrX:155468286-155487046
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 553 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447347.1; RP11-218L14.4-001; OTTHUMT00000058813.1; NONHSAT139239
Alternative gene names: ENSG00000225393.1; RP11-218L14.4; OTTHUMG00000022671.1; BX571846.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.6907 non-coding 
CPAT coding probability 14.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F8A2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F8A2-1:2
4.0 lnc-F8A2-1:2
4.1 lnc-F8A2-1:2
5.0 lnc-F8A2-1:2
5.1 lnc-MAGEA11-96:2
5.2 lnc-F8A2-1:2