Transcript: lnc-FAAP20-1:4

Basic information

LNCipedia transcript ID: lnc-FAAP20-1:4 
LNCipedia gene ID: lnc-FAAP20-1
Location (hg38): chr1:2198063-2203882
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 703 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT000398
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.1096 non-coding 
CPAT coding probability 40.59% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAAP20-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL590822.1-1:4
4.0 lnc-AL590822.1-1:4
4.1 lnc-AL590822.1-1:4
5.0 lnc-AL590822.1-1:4
5.1 lnc-CLSTN1-117:4
5.2 lnc-FAAP20-1:4