Transcript: lnc-FAAP20-4:1

Basic information

LNCipedia transcript ID: lnc-FAAP20-4:1 
LNCipedia gene ID: lnc-FAAP20-4
Location (hg38): chr1:2223196-2227639
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4444 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000043759.1|ENCT00000020818.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.6853 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAAP20-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL590822.1-4:1
5.0 lnc-AL590822.1-4:1
5.1 lnc-CLSTN1-114:1
5.2 lnc-FAAP20-4:1