Transcript: lnc-FADD-1:1

Basic information

LNCipedia transcript ID: lnc-FADD-1:1 
LNCipedia gene ID: lnc-FADD-1
Ensembl Gene ID: ENSG00000255143
Ensembl Transcript ID: ENST00000530525
Location (hg38): chr11:70129297-70149623
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 497 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000530525.1; RP11-805J14.3-001; OTTHUMT00000393723.1; NONHSAT022634
Alternative gene names: ENSG00000255143.1; RP11-805J14.3; OTTHUMG00000167197.2; AP000879.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.4352 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FADD-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FADD-1:1
4.0 lnc-FADD-1:1
4.1 lnc-FADD-1:1
5.0 lnc-FADD-1:1
5.1 lnc-TCIRG1-44:1
5.2 lnc-FADD-1:1