Transcript: lnc-FAM109A-5:4

Basic information

LNCipedia transcript ID: lnc-FAM109A-5:4 
LNCipedia gene ID: lnc-FAM109A-5
Location (hg38): chr12:111456189-111458401
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1256 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT030742
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.8295 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM109A-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM109A-1:4
4.0 lnc-FAM109A-1:4
4.1 lnc-FAM109A-1:4
5.0 lnc-FAM109A-1:4
5.1 lnc-FAM109A-4:4
5.2 lnc-FAM109A-5:4