Transcript: lnc-FAM110B-1:7

Basic information

LNCipedia transcript ID: lnc-FAM110B-1:7 
LNCipedia gene ID: lnc-FAM110B-1
Location (hg38): chr8:58070227-58198092
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 586 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT126770
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.889 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM110B-1:7 no no no no

Available literature

  1. Wang (2016), Transcriptome Analysis of Long Noncoding RNAs in Toll-Like Receptor 3-Activated Mesenchymal Stem Cells., Stem Cells Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM110B-1:7
4.0 lnc-FAM110B-1:7
4.1 lnc-FAM110B-1:7
5.0 lnc-FAM110B-1:7
5.1 lnc-SDCBP-8:5
5.2 lnc-FAM110B-1:7