Transcript: lnc-FAM120B-5:2

Basic information

LNCipedia transcript ID: lnc-FAM120B-5:2 
LNCipedia gene ID: lnc-FAM120B-5
Location (hg38): chr6:170147250-170150907
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 438 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012030; NONHSAT116251
Alternative gene names: XLOC_005561; linc-FAM120B-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.7771 non-coding 
CPAT coding probability 19.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM120B-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM120B-3:2
3.1 lnc-FAM120B-5:2
4.0 lnc-FAM120B-5:2
4.1 lnc-FAM120B-5:2
5.0 lnc-FAM120B-5:2
5.1 lnc-SYTL3-129:2
5.2 lnc-FAM120B-5:2