Transcript: lnc-FAM153C-1:15

Basic information

LNCipedia transcript ID: lnc-FAM153C-1:15 
LNCipedia gene ID: lnc-FAM153C-1
Location (hg38): chr5:178058552-178063737
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1340 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT105513; FPKM1_group_26860_transcript_6
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.794 non-coding 
CPAT coding probability 5.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM153C-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM153C-1:15
4.0 lnc-FAM153C-1:15
4.1 lnc-FAM153C-1:15
5.0 lnc-FAM153C-1:15
5.1 lnc-MAML1-25:10
5.2 lnc-FAM153C-1:15