Transcript: lnc-FAM153C-5:16

Basic information

LNCipedia transcript ID: lnc-FAM153C-5:16 
LNCipedia gene ID: lnc-FAM153C-5
Ensembl Gene ID: ENSG00000280207
Ensembl Transcript ID: ENST00000623288
Location (hg38): chr5:177967004-177967457
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 454 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623288.1
Alternative gene names: ENSG00000280207.1; RP11-423H2.4; AC106795.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.0077 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM153C-5:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM153C-8:1
4.1 lnc-FAM153C-5:16
5.0 lnc-FAM153C-5:16
5.1 lnc-MAML1-30:16
5.2 lnc-FAM153C-5:16