Transcript: lnc-FAM167A-2:1

Basic information

LNCipedia transcript ID: lnc-FAM167A-2:1 
LNCipedia gene ID: lnc-FAM167A-2
Ensembl Gene ID: ENSG00000269954
Ensembl Transcript ID: ENST00000602626
Location (hg38): chr8:11552488-11564694
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1789 bp
Exons: 9
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000602626.2
Alternative gene names: ENSG00000269954.2; AC022239.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.0682 non-coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM167A-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PINX1-25:1
5.1 lnc-PINX1-25:1
5.2 lnc-FAM167A-2:1