Transcript: lnc-FAM167A-6:1

Basic information

LNCipedia transcript ID: lnc-FAM167A-6:1 
LNCipedia gene ID: lnc-FAM167A-6
Ensembl Gene ID: ENSG00000254556
Ensembl Transcript ID: ENST00000531549
Location (hg38): chr8:11136898-11138607
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1710 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000531549.1; AF131215.4-001; OTTHUMT00000383956.1; NONHSAT125040
Alternative gene names: ENSG00000254556.1; AF131215.4; OTTHUMG00000165426.1; AF131215.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.1323 non-coding 
CPAT coding probability 5.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM167A-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AF131215.4.1-1:1
4.0 lnc-AF131215.4.1-1:1
4.1 lnc-AF131215.4.1-1:1
5.0 lnc-AF131215.4.1-1:1
5.1 lnc-PINX1-13:1
5.2 lnc-FAM167A-6:1