Transcript: lnc-FAM172A-7:8

Basic information

LNCipedia transcript ID: lnc-FAM172A-7:8 
LNCipedia gene ID: lnc-FAM172A-7
Location (hg38): chr5:92557642-92688226
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2609 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249776.1|ENCT00000359930.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -71.4992 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM172A-7:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM172A-7:8
5.0 lnc-FAM172A-7:8
5.1 lnc-ANKRD34B-178:5
5.2 lnc-FAM172A-7:8