Transcript: lnc-FAM174A-1:2

Basic information

LNCipedia transcript ID: lnc-FAM174A-1:2 
LNCipedia gene ID: lnc-FAM174A-1
Location (hg38): chr5:100401460-100420748
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1011 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010049; NONHSAT102999
Alternative gene names: XLOC_004490; linc-FAM174A-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.4906 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM174A-1:2
3.1 lnc-FAM174A-1:2
4.0 lnc-FAM174A-1:2
4.1 lnc-FAM174A-1:2
5.0 lnc-FAM174A-1:2
5.1 lnc-GPR150-78:2
5.2 lnc-FAM174A-1:2