Transcript: lnc-FAM174B-1:3

Basic information

LNCipedia transcript ID: lnc-FAM174B-1:3 
LNCipedia gene ID: lnc-FAM174B-1
Location (hg38): chr15:92592579-92596388
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3810 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000565107.1; RP11-386M24.6-001; OTTHUMT00000422054.1; NONHSAT049440
Alternative gene names: ENSG00000260337.1; RP11-386M24.6; OTTHUMG00000173074.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.3852 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174B-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM174B-1:3
4.0 lnc-FAM174B-1:3
4.1 lnc-FAM174B-1:3
5.0 lnc-FAM174B-1:3
5.1 lnc-CIB1-30:5
5.2 lnc-FAM174B-1:3