Transcript: lnc-FAM174B-1:4

Basic information

LNCipedia transcript ID: lnc-FAM174B-1:4 
LNCipedia gene ID: lnc-FAM174B-1
Location (hg38): chr15:92592572-92596321
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1947 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023789; NONHSAT049439
Alternative gene names: XLOC_011585; linc-VPS33B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.9755 non-coding 
CPAT coding probability 6.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174B-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM174B-1:2
3.1 lnc-FAM174B-1:4
4.0 lnc-FAM174B-1:4
4.1 lnc-FAM174B-1:4
5.0 lnc-FAM174B-1:4
5.1 lnc-CIB1-30:7
5.2 lnc-FAM174B-1:4