Transcript: lnc-FAM174B-2:13

Basic information

LNCipedia transcript ID: lnc-FAM174B-2:13 
LNCipedia gene ID: lnc-FAM174B-2
Location (hg38): chr15:92787914-92788472
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 449 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000557545.1; CTD-2313J17.2-001; OTTHUMT00000414948.1
Alternative gene names: ENSG00000258382.1; CTD-2313J17.2; OTTHUMG00000171748.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.09 non-coding 
CPAT coding probability 3.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174B-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGMA-2:4
4.0 lnc-FAM174B-2:13
4.1 lnc-FAM174B-2:13
5.0 lnc-FAM174B-2:13
5.1 lnc-CIB1-35:7
5.2 lnc-FAM174B-2:13