Transcript: lnc-FAM189A2-4:1

Basic information

LNCipedia transcript ID: lnc-FAM189A2-4:1 
LNCipedia gene ID: lnc-FAM189A2-4
Location (hg38): chr9:69603004-69604479
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1476 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_engstrom06_BM705037_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.7517 non-coding 
CPAT coding probability 1.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM189A2-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM189A2-4:1
4.0 lnc-FAM189A2-4:1
4.1 lnc-FAM189A2-4:1
5.0 lnc-FAM189A2-4:1
5.1 lnc-ZNF658-41:1
5.2 lnc-FAM189A2-4:1