Transcript: lnc-FAM196A-1:11

Basic information

LNCipedia transcript ID: lnc-FAM196A-1:11 
LNCipedia gene ID: lnc-FAM196A-1
Location (hg38): chr10:127000386-127015144
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 647 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT016947
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.808 non-coding 
CPAT coding probability 7.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM196A-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM196A-1:11
4.0 lnc-FAM196A-1:11
4.1 lnc-FAM196A-1:11
5.0 lnc-FAM196A-1:11
5.1 lnc-ADAM12-5:14
5.2 lnc-FAM196A-1:11