Transcript: lnc-FAM212B-5:3

Basic information

LNCipedia transcript ID: lnc-FAM212B-5:3 
LNCipedia gene ID: lnc-FAM212B-5
RefSeq ID: NR_125963
Location (hg38): chr1:111745317-111755509
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2767 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125963; NR_125963.1
Alternative gene names: LOC101928718


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.0524 non-coding 
CPAT coding probability 28.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM212B-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCND3-2:4
4.0 lnc-KCND3-2:4
4.1 lnc-KCND3-2:4
5.0 lnc-KCND3-2:4
5.1 lnc-DENND2D-15:3
5.2 lnc-FAM212B-5:3