Transcript: lnc-FAM212B-5:4

Basic information

LNCipedia transcript ID: lnc-FAM212B-5:4 
LNCipedia gene ID: lnc-FAM212B-5
Ensembl Gene ID: ENSG00000284830
Ensembl Transcript ID: ENST00000527660
Location (hg38): chr1:111746709-111747699
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 461 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT005203; ENST00000527660.1
Alternative gene names: ENSG00000284830.1; AL049557.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.334 non-coding 
CPAT coding probability 4.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM212B-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCND3-2:3
4.0 lnc-KCND3-2:3
4.1 lnc-KCND3-2:3
5.0 lnc-KCND3-2:3
5.1 lnc-DENND2D-15:4
5.2 lnc-FAM212B-5:4