Transcript: lnc-FAM229A-1:2

Basic information

LNCipedia transcript ID: lnc-FAM229A-1:2 
LNCipedia gene ID: lnc-FAM229A-1
Location (hg38): chr1:32361271-32364223
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2759 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000416512; NONHSAT002202
Alternative gene names: ENSG00000225828; RP4-811H24.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 447.2103 coding 
CPAT coding probability 11.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM229A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BSDC1-1:2
3.1 lnc-BSDC1-1:2
4.0 lnc-RP4-811H24.6.1-1:3
4.1 lnc-RP4-811H24.6.1-1:3
5.0 lnc-RP4-811H24.6.1-1:3
5.1 lnc-RNF19B-14:2
5.2 lnc-FAM229A-1:2