Transcript: lnc-FAM236B-4:2

Basic information

LNCipedia transcript ID: lnc-FAM236B-4:2 
LNCipedia gene ID: lnc-FAM236B-4
RefSeq ID: NR_120493
Location (hg38): chrX:72781865-72782660
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 465 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT137509; NR_034116; NR_120493.1
Alternative gene names: LOC100132304


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.3606 non-coding 
CPAT coding probability 7.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM236B-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHKA1-1:3
4.0 lnc-PHKA1-4:2
4.1 lnc-PHKA1-4:2
5.0 lnc-PHKA1-4:2
5.1 lnc-PHKA1-4:2
5.2 lnc-FAM236B-4:2