Transcript: lnc-FAM237B-2:4

Basic information

LNCipedia transcript ID: lnc-FAM237B-2:4 
LNCipedia gene ID: lnc-FAM237B-2
Ensembl Gene ID: ENSG00000223969
Ensembl Transcript ID: ENST00000441971
Location (hg38): chr7:90590623-90595890
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 450 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441971.1; AC002456.2-001; OTTHUMT00000138093.2; NONHSAT121923; ENST00000441971.5
Alternative gene names: ENSG00000223969.1; AC002456.2; OTTHUMG00000063906.3; ENSG00000223969.5; AC002456.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM237B-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTERF-6:2
4.0 lnc-MTERF-6:2
4.1 lnc-MTERF-6:2
5.0 lnc-MTERF-6:2
5.1 lnc-PEX1-31:4
5.2 lnc-FAM237B-2:4