Transcript: lnc-FAM241B-2:1

Basic information

LNCipedia transcript ID: lnc-FAM241B-2:1 
LNCipedia gene ID: lnc-FAM241B-2
Location (hg38): chr10:69667228-69691773
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1899 bp
Exons: 7
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00017837; ENST00000434931; ENST00000434931.1; RP11-242G20.1-001; OTTHUMT00000048466.1; NONHSAT013813
Alternative gene names: XLOC_008506; linc-COL13A1; ENSG00000235645; RP11-242G20.1; ENSG00000235645.1; OTTHUMG00000018393.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.1836 non-coding 
CPAT coding probability 3.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM241B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf35-1:1
3.1 lnc-C10orf35-2:1
4.0 lnc-C10orf35-2:1
4.1 lnc-C10orf35-2:1
5.0 lnc-C10orf35-2:1
5.1 lnc-MTRNR2L5-117:1
5.2 lnc-FAM241B-2:1