Transcript: lnc-FAM25C-31:2

Basic information

LNCipedia transcript ID: lnc-FAM25C-31:2 
LNCipedia gene ID: lnc-FAM25C-31
Ensembl Gene ID: ENSG00000276850
Ensembl Transcript ID: ENST00000610809
Location (hg38): chr10:47985519-47991850
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1962 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610809.1
Alternative gene names: ENSG00000276850.4; CH17-360D5.2; AC245041.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 32.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM25C-31:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LRRC18-31:2
5.1 lnc-LRRC18-31:2
5.2 lnc-FAM25C-31:2